BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G03LP1|AL429945
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig247 1249 0.0
>3x_Contig247
Length = 997
Score = 1249 bits (629), Expect = 0.0
Identities = 653/661 (98%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 1 tcttatcaatatcatcagcgaaaacatcgtcactaatgttcacactggaattaatttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tcttatcaatatcatcagcgaaaacatcgtcactaatgttcacactggaattaatttgtt 397
Query: 61 tcgcatcgccacaaaccagatctttatacaattgatacgaaacgtagcaaaatagtggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tcgcatcgccacaaaccagatctttatacaattgatacgaaacgtagcaaaatagtggga 457
Query: 121 aagttacctgcttacccaaaatcaaactcaagtcgattcccatgtatctatccttaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aagttacctgcttacccaaaatcaaactcaagtcgattcccatgtatctatccttaaagt 517
Query: 181 aaatcaatactgtttccgaacgtaatcgcttcttatcttttagttttcgaactgaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaatcaatactgtttccgaacgtaatcgcttcttatcttttagttttcgaactgaaattt 577
Query: 241 gccagawataagtgaattgatcttaaagagtttatatatgaatctttcagcccgtttata 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gccagatataagtgaattgatcttaaagagtttatatatgaatctttcagcccgtttata 637
Query: 301 ttacagttttgacgaccgcaacaaaatccccgataatgaatcatacttgaagaaactgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttacagttttgacgaccgcaacaaaatccccgataatgaatcatacttgaagaaactgtc 697
Query: 361 atgatcccgtctctgtatctcatgtagtgatatcagtggcctcacttttttttttttaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atgatcccgtctctgtatctcatgtagtgatatcagtggcctcacttttttttttttaaa 757
Query: 421 awtgtatgcgcgagaacaaccctaaaacactggagacgtggaagattccaacggaaattc 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 attgtatgcgcgagaacaaccctaaaacactggagacgtggaagattccaacggaaattc 817
Query: 481 gaaacatatcgctcgaaggaagggaattttaaagttatgaaatattacggcgagggatcg 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 818 gaaacatatcgctcgaaggaagggaatttcaaagttatgaaatattacggcgagggatcg 877
Query: 541 gaactcaatatccatcaattttgataaggtaagcttgcttgcctaatacagatgaaatat 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 gaactcaatatccatcaattttgataaggtaagcttgcttgcctaatacagatgaaatac 937
Query: 601 aggtcgaacatggcaattgcgatattgtagctatttaccaaataaattgggtacgatatt 660
|||||||||||||||||||||||||||||||||||| || ||||| ||||||| ||||||
Sbjct: 938 aggtcgaacatggcaattgcgatattgtagctattt-cccaataacttgggtaagatatt 996
Query: 661 t 661
|
Sbjct: 997 t 997
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,875
Number of Sequences: 1807
Number of extensions: 12875
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)